Institut NeuroMyoGène
    Laboratoire Physiopathologie et Génétique du Neurone et du Muscle
    CNRS UMR 5261 -INSERM U1315
    Université de Lyon - Université Claude Bernard Lyon 1
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Nucleolar Dynamic Reorganization in action during DNA Repair (Nu-DyRection)

One of the most fascinating and relatively unexplored areas in the field of DNA repair is how cells restore their normal functions after completing the processes that eliminate DNA lesions and re-establish DNA sequence continuity. DNA lesions not only impede transcription, replication, and the cell cycle, but may also disrupt the proper positioning of chromatin domains within the nucleus and alter nucleolar organization.
Our team is focused on the molecular mechanisms involved in the restoration of transcriptional activity, particularly the reorganization of nucleolar structure following DNA damage and repair.

DNA damage Nucleolus RNA polymerase I and II Spinal Muscular Atrophy (SMA) Nucleotide Excision Repair (NER) Base Excision Repair (BER)Neurons

L’ÉQUIPE
  • Ambra GIGLIA-MARI
    SENIOR RESEARCHER CNRS, HDR
    ORCID
    ResearchGate
  • Pierre-Olivier MARI
    RESEARCHER CNRS
    ORCID
  • Lise-Marie DONNIO
    POST-DOCTORANT
    ORCID
  • Charlène MAGNANI
    TECHNICIAN, UCBL
    ORCID
  • Jean-Luc THOMAS
    RESEARCH ENGINEER, CNRS
  • Jianbo HUANG
    PHD STUDENT
    ORCID
  • Zehui ZHAO
    PHD STUDENT
    ORCID
  • Phoebe RASSINOUX
    PHD STUDENT
    ORCID
  • Candice BENEDETTI
    PHD STUDENT
  • Manon COURTIEUX
    ASSISTANT ENGINEER UCBL
  • Camille PERRET
    ASSISTANT ENGINEER UCBL
  • Zoé FRANCOIS
    ASSISTANT ENGINEER UCBL

PREVIOUS MEMBERS

  • Shaqraa MUSAWI
    PHD STUDENT

Project
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Annuaire

PROJECT

The nucleolus is a membraneless nuclear organelle with a highly structured internal organization. This organization is associated with its various functions in ribosomal biogenesis: transcription of ribosomal DNA (rDNA) by RNA Polymerase 1 (RNAP1) and the early maturation of ribosomal RNA. This highly organized structure can be significantly disrupted by both genotoxic agents and general cellular stress.
In the last years, we have shown that after a genotoxic stress (UV: Ultraviolet irradiation), RNAP1 and nucleolar DNA are exported to the periphery of the nucleolus. Interestingly, proper nucleolar structure is only restored after the complete repair of all the lesions on the nucleolar DNA, both active and inactive regions. In addition to an efficient repair system, the restoration of normal nucleolar structure after DNA repair completion requires the presence of key proteins.
One such protein is SMN (Survival of Motor Neuron), which is altered in patients suffering from Spinal Muscular Atrophy (SMA). We have found that in absence of SMN, RNAP1 remains at the periphery of the nucleolus after DNA damage repair. Unexpectedly, we observed that SMN shuttles from Cajal bodies (CBs) into the nucleolus after the completion of DNA repair, but before the restoration of nucleolar structure. Together with SMN, other proteins, such as Fibrillarin (FBL), Coilin, Nuclear Myosin 1 (NM1), appear to be also important for this process.

Our group has the following objectives:

  • To investigate the dynamic reorganization of nucleoli following stress
  • To elucidate the mechanism by which nucleolar homeostasis is restored upon DNA repair completion
  • To identify the critical factors governing nucleolar homeostasis during and after DNA Repair

SELECTED PUBLICATIONS

Keep calm and reboot – how cells restart transcription after DNA damage and DNA repair
Donnio LM, Giglia-Mari G.
FEBS letter. 2024 Jul

Decline of DNA damage response along with myogenic differentiation
Sutcu H, Rassinoux P, Donnio LM, Neuillet D, Vianna F, Gabillot O, Mari PO, Baldeyron C, Giglia-Mari G.
Life Science Alliance. 2023 Nov

Nucleolar Reorganizaton after cellular stress is orchestrated by SMN shuttling between nuclear compartments
Musawi S, Donnio LM, Zhao Z, Magnani C, Rassinoux P, Binda O, Huang J, Jacquier A, Coudert L, Lomonte P, Martinat C, Schaeffer L, Mottet D, Côté J, Mari PO, Giglia-Mari G.
Nature Communications. 2023 Nov

XAB2 Dynamics during DNA Damage-Dependent Transcription Inhibition
Donnio LM, Cerutti E, Magnani C, Neuillet D, Mari PO, Giglia-Mari G.
Elife. 2022 Jul

A stable XPG protein is required for proper ribosome biogenesis: Insights on the phenotype of combinate Xeroderma Pigmentosum/Cockayne Syndrome patients.
Taupelet F, Donnio LM, Magnani C, Mari PO, Giglia-Mari G.
PLoS One. 2022 Jul

Actin and Nuclear Myosin I are responsible for nucleolar reorganization during DNA Repair
Cerutti E , Daniel L, Donnio LM, Neuillet D, Magnani C, Mari PO, Giglia-Mari G.
BioRXiv.

Cell-type specific concentration regulation of the basal transcription factor TFIIH in XPBy/y mice model.
Donnio LM, Miquel C, Vermeulen W, Giglia-Mari G, Mari PO.
Cancer Cell International. 2019 Sep

CSB-Dependent Cyclin-Dependent Kinase 9 Degradation and RNA Polymerase II Phosphorylation during Transcription-Coupled Repair.
Donnio LM, Lagarou A, Sueur G, Mari PO, Giglia-Mari G.
Molecular and Cellular Bioliolgy. 2019 Mar

Mechanistic insights in transcription-coupled nucleotide excision repair of ribosomal DNA.
Daniel L, Cerutti E, Donnio LM, Nonnekens J, Carrat C, Zahova S, Mari PO, Giglia-Mari G.
Proceedings of the National Academy of Sciences U S A. 2018 Jul


FUNDINGS
  • FRM team (EQU202403018017) (2025-01 to 2027-12)
  • ANR (2024-10 to 2026-09)
  • Ambition international – La région Auvergne-Rhône-Alpes (00237543) (2024-09 to 2029-08)
  • ARSLA (2024-06 to 2026-05)
  • JPND (EU-Joint Programme – Neurodegenerative Disease) (2024-01 to 2026-12)
  • AFM Myoneuralp 2 (2021-01 to 2025-12)

Équipes FRM 2021 ANR-logo-2021-sigle | Université Paris CitéFichier:Logo Auvergne-Rhône-Alpes.svg — WikipédiaJPND Logo - JPND Neurodegenerative Disease ResearchL'ARSLA modernise son logo ! - ARSLA

Email

ambra.mari@univ-lyon1.fr

Téléphone

+33 4 26 68 82 62

Adresse

Institut NeuroMyoGene (INMG) – Laboratoire Physiopathologie et Génétique du Neurone et du Muscle (PGNM)

UCBL – CNRS UMR 5261 – INSERM U1315
Faculté de Médecine et de Pharmacie

3ème étage
8 avenue Rockefeller
69008 LYON


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